feat(model-grounded-detection): tasks 2.1-2.2, the Joern seam and the taint verdict

The whole engine integration is one subprocess boundary: joern-parse builds a
cpg.bin, joern --script runs a shipped CPGQL query that prints its JSON between
fence markers, because Joern's stdout carries a banner and a REPL prompt around
whatever a script emits. Nothing is imported in-process, so the core install
keeps dependencies = [] -- a test walks the seam's AST to assert it imports
only the standard library and names no JVM binding.

Fail closed everywhere. A build or query that errors, times out, or prints
something unparseable yields no verdict and the caller reports suspicion. The
taint verdict distinguishes this from absence deliberately: a query returning
None means "the engine could not decide", which is not "there is no flow", and
conflating them is how a missing engine silently becomes a clean bill of health.

The verdict is where the ladder earns its keep. An unsanitized source->sink
path is model_entailed -- the graph establishes it and the LLM's claim is no
longer load-bearing. A path a sanitizer may break is model_corroborated: the
flow is real, but whether the sanitizer suffices is the semantic residual the
LLM answers, checked against this verdict rather than averaged over runs. The
chosen flow is picked by a total order (shortest, then lexicographic), so two
runs over one CPG cannot disagree -- Req 6.4 asserted directly.

The query itself is the part our flat IR could not do: reachableByFlows walks
the PDG, so `q = "..." + request.args["x"]; execute(q)` is found, which is
exactly the one-hop limit that held measured entailment at 2.2%.

Capability detection reuses semantic/engines.joern_available rather than
growing a second notion of "installed". The audit manifest is regenerated; the
new modules are named by Req 4/5/6 rather than counted as orphans.

Task 2.3, the go/no-go measurement, needs Joern installed and has not run.

Co-Authored-By: Claude Opus 5 (1M context) <[email protected]>
Claude-Session: https://claude.ai/code/session_01T7XD7x5KonMdmGRkp63EQG
This commit is contained in:
Marius Ciepluch
2026-09-08 12:23:40 +02:00
co-authored by Claude Opus 5
parent 9ed0e45c5f
commit 2b973dc0db
10 changed files with 632 additions and 5 deletions
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"""The Joern subprocess seam — the single place this codebase touches a CPG engine (Req 4.1, 4.4, 4.5).
Joern is JVM/Scala. Everything crosses one subprocess boundary: ``joern-parse`` builds a ``cpg.bin`` from a
source tree, then ``joern --script`` runs a CPGQL script that prints a JSON payload. Nothing is imported
in-process, so the core install keeps ``dependencies = []`` and an absent engine costs a recorded reason
rather than a traceback.
Two rules hold everywhere below:
* **Fail closed.** A build or query that errors, times out, or prints something unparseable yields *no*
verdict. The model layer then reports ``suspicion``. A wrong verdict is worse than no verdict — that is the
whole reason this arbiter exists.
* **Fence the payload.** Joern prints a banner, compilation notices and a REPL prompt on stdout. The script
brackets its JSON between markers so parsing can never swallow the noise around it.
We do not build a control-flow or dataflow engine here (Req 4.4): the CFG, PDG and call graph our flat IR
lacks are exactly what is being adopted.
"""
from __future__ import annotations
import json
import logging
import os
import shutil
import subprocess
import tempfile
from collections.abc import Callable, Mapping
from dataclasses import dataclass, field
from pathlib import Path
from typing import Protocol
logger = logging.getLogger(__name__)
QUERIES_DIR = Path(__file__).resolve().parent / "queries"
# The payload fence. Joern's stdout carries a banner and a prompt; the script prints these around its JSON.
BEGIN = "---OUSAST-CPG-BEGIN---"
END = "---OUSAST-CPG-END---"
BUILD_TIMEOUT_SECONDS = 900 # a large tree takes minutes; the go/no-go records what it actually cost
QUERY_TIMEOUT_SECONDS = 300
Runner = Callable[..., subprocess.CompletedProcess[str]]
def extract_payload(stdout: str) -> object | None:
"""The JSON between the fence markers, or ``None`` when it is absent or malformed."""
start = stdout.find(BEGIN)
end = stdout.find(END, start + 1) if start >= 0 else -1
if start < 0 or end < 0:
return None
body = stdout[start + len(BEGIN) : end].strip()
try:
payload: object = json.loads(body)
except json.JSONDecodeError:
logger.debug("cpg query payload was not valid JSON")
return None
return payload
@dataclass(frozen=True)
class CpgResult:
"""A built CPG and the way to query it. Opaque: only ``model/`` reads through ``run``."""
cpg_path: Path
run: Callable[[str, Mapping[str, object]], object | None]
class CpgBackend(Protocol):
def available(self) -> bool: ...
def build(self, root: Path) -> CpgResult | None: ...
@dataclass
class NullBackend:
"""No engine. Every verdict degrades to ``suspicion`` and the caller records ``cpg_unavailable``."""
reason: str = "cpg_unavailable"
def available(self) -> bool:
return False
def build(self, root: Path) -> CpgResult | None:
del root
return None
@dataclass
class JoernBackend:
"""``joern-parse`` then ``joern --script``, both out of process and both timeout-bounded."""
runner: Runner | None = None
build_timeout: int = BUILD_TIMEOUT_SECONDS
query_timeout: int = QUERY_TIMEOUT_SECONDS
queries_dir: Path = field(default_factory=lambda: QUERIES_DIR)
def available(self) -> bool:
from .capability import has_cpg
return has_cpg()
def build(self, root: Path) -> CpgResult | None:
"""Build a CPG for ``root``. ``None`` on any failure — the caller degrades, never guesses."""
parse = shutil.which("joern-parse")
if parse is None and os.environ.get("OPENULTRASAST_JOERN_PROBE", "").strip().lower() not in {"1", "on", "true", "yes"}:
return None
scratch = Path(tempfile.mkdtemp(prefix="ousast-cpg-"))
cpg_path = scratch / "cpg.bin"
command = [parse or "joern-parse", str(root), "--output", str(cpg_path)]
completed = self._run(command, timeout=self.build_timeout)
if completed is None or completed.returncode != 0 or not cpg_path.is_file():
detail = (completed.stderr or completed.stdout or "")[-400:] if completed is not None else "timeout"
logger.warning("cpg build failed for %s: %s", root, detail)
return None
return CpgResult(cpg_path=cpg_path, run=lambda query, params: self.query(cpg_path, query, params))
def query(self, cpg_path: Path, query: str, params: Mapping[str, object]) -> object | None:
"""Run a shipped CPGQL script against a built CPG and return its fenced JSON payload."""
script = self.queries_dir / f"{query}.sc"
if not script.is_file():
logger.warning("no such cpg query: %s", script)
return None
command = [shutil.which("joern") or "joern", "--script", str(script), "--param", f"cpgFile={cpg_path}"]
for key, value in sorted(params.items()):
command += ["--param", f"{key}={_render(value)}"]
completed = self._run(command, timeout=self.query_timeout)
if completed is None or completed.returncode != 0:
detail = (completed.stderr or "")[-400:] if completed is not None else "timeout"
logger.warning("cpg query %s failed: %s", query, detail)
return None
return extract_payload(completed.stdout or "")
def _run(self, command: list[str], *, timeout: int) -> subprocess.CompletedProcess[str] | None:
run = self.runner if self.runner is not None else subprocess.run
try:
return run(command, capture_output=True, text=True, timeout=timeout, check=False)
except (OSError, subprocess.SubprocessError):
return None
def _render(value: object) -> str:
"""CPGQL parameters are strings; a sequence becomes a comma-separated list the script splits."""
if isinstance(value, str):
return value
if isinstance(value, (list, tuple, set, frozenset)):
return ",".join(sorted(str(item) for item in value))
return str(value)
def resolve_cpg_backend(*, runner: Runner | None = None) -> CpgBackend:
"""The backend for this machine: Joern when it is installed, else the null one."""
from .capability import has_cpg
return JoernBackend(runner=runner) if has_cpg() else NullBackend()
__all__ = [
"BEGIN",
"END",
"CpgBackend",
"CpgResult",
"JoernBackend",
"NullBackend",
"extract_payload",
"resolve_cpg_backend",
]