feat(independent): fixed-pin recheck and an exploratory scorer for the batched verifier

- verify_batched.py --fixed asks the agreed candidates again at the fixed pin
  (no triage); a function the fix removed is recorded as removed.
- score_batched.py applies protocol v2's matching to the batched output
  (vulnerable pin, and the fixed pin where rechecked) and draws the precision
  sample.
- A finding's site is anchored to the candidate operation asked about; the
  model's own reported location is kept in `reported_at`. ReactPress's confirmed
  findAll was reported at the controller file and failed to match its declared
  site. The scorer anchors older records the same way.

Co-Authored-By: Claude Fable 5.1 <[email protected]>
Claude-Session: https://claude.ai/code/session_01EmM1j46qgKMh3zqD1QMwEo
This commit is contained in:
Marius Ciepluch
2026-09-29 10:25:08 +02:00
co-authored by Claude Fable 5.1
parent 072a102b20
commit 6acd354311
2 changed files with 118 additions and 4 deletions
+90
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@@ -0,0 +1,90 @@
"""Exploratory score of a batched-verifier run against the population's cases (protocol v2 matching).
The batched verifier writes one vulnerable-pin result per case (and a fixed-pin recheck with --fixed), not the
six pins protocol v2 scores, so this applies the same matching rule (`evaluate.matches_v2`) to what exists:
detected when an AGREED finding matches; unstable when only a DISPUTED one does; fixed-side alert when an agreed
finding at the fixed pin matches the fix's new side. The precision sample is every third agreed vulnerable-pin
finding (all if 15 or fewer), to be adjudicated by hand. v2 is spent for tuning: this qualifies nothing.
Usage: python benchmarks/independent/score_batched.py [--results-suffix batched] [--population population-v2.toml]
"""
from __future__ import annotations
import argparse
import json
import sys
from pathlib import Path
HERE = Path(__file__).resolve().parent
sys.path.insert(0, str(HERE))
import evaluate # noqa: E402
def anchored(result: dict) -> dict:
"""Sites anchored to the candidate asked about (older records used the model's reported location)."""
for key in ("findings", "disputed"):
for f in result.get(key, []):
path, _, function = f["candidate"].partition("::")
site_path, _, rest = f["site"].partition(":")
line = rest.split(":")[0] if site_path == path else "0"
f["site"] = f"{path}:{line}:{function}"
return result
def main() -> int:
parser = argparse.ArgumentParser(description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter)
parser.add_argument("--population", type=Path, default=HERE / "population-v2.toml")
parser.add_argument("--results-suffix", default="batched")
args = parser.parse_args()
evaluate.use(args.population)
results = evaluate.RESULTS.with_name(evaluate.RESULTS.name + "-" + args.results_suffix)
scans = results / "scans"
per_case, pool = [], []
for case in evaluate.cases():
path = scans / f"{case['id']}--vulnerable_a.json"
if not path.is_file():
per_case.append({"id": case["id"], "status": "incomplete"})
continue
vulnerable = anchored(json.loads(path.read_text()))
old, new = evaluate.hunks(case, "old"), evaluate.hunks(case, "new")
agreed = [f["site"] for f in vulnerable["findings"] if evaluate.matches_v2(f, case, old)]
disputed = [f["site"] for f in vulnerable.get("disputed", []) if evaluate.matches_v2(f, case, old)]
fixed_path = scans / f"{case['id']}--fixed_a.json"
fixed = anchored(json.loads(fixed_path.read_text())) if fixed_path.is_file() else None
fixed_alerts = [f["site"] for f in fixed["findings"] if evaluate.matches_v2(f, case, new)] if fixed else None
per_case.append(
{
"id": case["id"], "family": case["family"], "detected": bool(agreed), "detected_sites": agreed,
"unstable": bool(disputed) and not agreed, "unstable_sites": disputed,
"agreed_findings": len(vulnerable["findings"]), "disputed_findings": len(vulnerable.get("disputed", [])),
"triaged_out": vulnerable.get("triaged_out"), "candidates": vulnerable.get("questions"),
"fixed_side_alerts": fixed_alerts, "fixed_agreed_total": len(fixed["findings"]) if fixed else None,
"removed_by_fix": fixed.get("removed_by_fix") if fixed else None, "usd": vulnerable.get("usd"), "usage": vulnerable.get("usage"),
}
) # fmt: skip
pool += [{"case": case["id"], **f} for f in vulnerable["findings"]]
pool.sort(key=lambda f: (f["case"], f["site"]))
sample = pool if len(pool) <= 15 else pool[0::3]
scored = [c for c in per_case if c.get("status") != "incomplete"]
detected = sum(c["detected"] for c in scored)
with_fixed = [c for c in scored if c["fixed_side_alerts"] is not None]
result = {
"protocol": "protocol-v2.md matching, exploratory (batched verifier, vulnerable + fixed pins only)",
"cases_scored": len(scored), "cases_incomplete": [c["id"] for c in per_case if c.get("status") == "incomplete"],
"recall": [detected, len(scored)], "recall_wilson95": evaluate.wilson(detected, len(scored)),
"unstable_detections": [c["id"] for c in scored if c["unstable"]],
"fixed_side_alerts": sum(len(c["fixed_side_alerts"]) for c in with_fixed) if with_fixed else None,
"fixed_pins_rechecked": len(with_fixed),
"pooled_agreed_findings": len(pool), "precision_sample_size": len(sample),
"usd": round(sum(float(c.get("usd") or 0) for c in scored), 2),
"cases": per_case, "precision_sample": sample,
} # fmt: skip
(results / "score.json").write_text(json.dumps(result, indent=2) + "\n")
print(json.dumps({k: v for k, v in result.items() if k not in ("cases", "precision_sample")}, indent=1))
return 0
if __name__ == "__main__":
raise SystemExit(main())
+28 -4
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@@ -122,7 +122,10 @@ def hunt(root: Path, path: str, group: list[list], family: str, model: str, step
fn = f.function_name or ""
if fn not in names: # attribute by the nearest listed line when the model renamed the function
fn = min(group, key=lambda c: abs((c[2] or 0) - (f.line or 0)))[1]
rows.append({"candidate": f"{path}::{fn}", "site": f"{f.path}:{f.line or 0}:{fn}", "family": family, "title": f.title, "witness": f.rationale[:600]})
# The verdict is about the candidate operation, so the site is the candidate's file and function; the
# model's own location is kept beside it (it often names the file where the input enters instead).
line = f.line if f.path == path else next(c[2] for c in group if c[1] == fn)
rows.append({"candidate": f"{path}::{fn}", "site": f"{path}:{line or 0}:{fn}", "reported_at": f"{f.path}:{f.line or 0}", "family": family, "title": f.title, "witness": f.rationale[:600]})
return rows, recording.usage()
@@ -177,6 +180,7 @@ def main() -> int:
parser.add_argument("--workers", type=int, default=4)
parser.add_argument("--budget-usd", type=float, default=40.0)
parser.add_argument("--results-suffix", default="batched")
parser.add_argument("--fixed", action="store_true", help="recheck the AGREED candidates of each case at its fixed pin (no triage)")
args = parser.parse_args()
load_config()
evaluate.use(args.population)
@@ -191,10 +195,11 @@ def main() -> int:
for case in evaluate.cases():
if only and case["id"] not in only or (subset is not None and case["id"] not in subset):
continue
out = out_dir / f"{case['id']}--vulnerable_a.json"
label = "fixed_a" if args.fixed else "vulnerable_a"
out = out_dir / f"{case['id']}--{label}.json"
if out.is_file():
continue
log = out_dir / f"{case['id']}--vulnerable_a.jsonl"
log = out_dir / f"{case['id']}--{label}.jsonl"
done = {r["path"]: r for r in (json.loads(row) for row in log.read_text().splitlines()) if "unverified" not in r} if log.is_file() else {}
spent += sum(float(r.get("usd", 0.0)) for r in done.values())
record = json.loads((candidates_dir / f"{case['id']}.json").read_text())
@@ -202,12 +207,29 @@ def main() -> int:
if subset is not None:
wanted = {tuple(x) for x in subset[case["id"]]}
unique = [c for c in unique if (c[0], c[1]) in wanted]
if args.fixed:
# The agreed findings at the vulnerable pin, by (path, function), asked again at the fixed pin. Line
# numbers are the vulnerable pin's; the file itself is in the prompt. A function the fix removed
# cannot be asked and counts as removed.
vulnerable_out = out_dir / f"{case['id']}--vulnerable_a.json"
if not vulnerable_out.is_file():
continue
agreed = {tuple(f["candidate"].split("::", 1)) for f in json.loads(vulnerable_out.read_text())["findings"]}
unique = [c for c in unique if (c[0], c[1]) in agreed]
settings = dict(settings, no_triage=True)
by_file: dict[str, list[list]] = {}
for c in unique:
by_file.setdefault(c[0], []).append(c)
pending = {p: cs for p, cs in by_file.items() if p not in done}
started = time.monotonic()
checkout = evaluate.export(case, "vulnerable_a", case["vulnerable"])
checkout = evaluate.export(case, label, case["fixed" if args.fixed else "vulnerable"])
if args.fixed:
present = [c for c in unique if (checkout / c[0]).is_file()]
removed = [f"{c[0]}::{c[1]}" for c in unique if (checkout / c[0]).is_file() is False]
unique, by_file = present, {}
for c in unique:
by_file.setdefault(c[0], []).append(c)
pending = {p: cs for p, cs in by_file.items() if p not in done}
account_error = ""
try:
with concurrent.futures.ProcessPoolExecutor(max_workers=args.workers) as pool, log.open("a") as sink:
@@ -245,6 +267,8 @@ def main() -> int:
"triaged_out": triaged_out, "passes": args.passes, "usage": usage, "usd": round(sum(float(r.get("usd", 0.0)) for r in done.values()), 4),
"seconds": round(time.monotonic() - started, 1), "findings": sorted(agreed, key=lambda f: f["site"]), "disputed": sorted(disputed, key=lambda f: f["site"]),
} # fmt: skip
if args.fixed:
result["removed_by_fix"] = removed
if complete:
out.write_text(json.dumps(result, indent=1) + "\n")
print(json.dumps({"case": case["id"], "files": f"{len(done)}/{len(by_file)}", "candidates": len(unique), "triaged_out": triaged_out, "agreed": len(agreed), "disputed": len(disputed), "usd": result["usd"], "total_usd": round(spent, 4), "complete": complete}), flush=True)