Merge unseen-corpus-bank: durable decision bank in ousast-corpus (stream + resume)

Co-Authored-By: Claude Opus 4.8 <[email protected]>
This commit is contained in:
Marius Ciepluch
2026-10-10 16:09:47 +02:00
co-authored by Claude Opus 4.8
5 changed files with 815 additions and 13 deletions
+160
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@@ -0,0 +1,160 @@
"""Durable, content-addressed draw decisions; object I/O stays on the coordinator."""
from __future__ import annotations
import hashlib
import json
import os
from collections.abc import Mapping
from datetime import UTC, datetime
from urllib.parse import urlencode, urlsplit
CORPUS_KEYS = ("CORPUS_S3_ENDPOINT", "CORPUS_S3_BUCKET", "CORPUS_AWS_ACCESS_KEY_ID", "CORPUS_AWS_SECRET_ACCESS_KEY")
def corpus_settings(environ: Mapping[str, str] | None = None) -> dict:
"""Read corpus-only credentials, naming missing settings without exposing values."""
if environ is None:
from openultrasast.config import load_dotenv
load_dotenv()
environ = os.environ
missing = [key for key in CORPUS_KEYS if not environ.get(key)]
if missing:
raise ValueError(f"Corpus bank needs {', '.join(missing)} in .env or the environment")
endpoint = environ["CORPUS_S3_ENDPOINT"].strip()
try:
parsed = urlsplit(endpoint)
valid_endpoint = parsed.scheme in ("http", "https") and bool(parsed.netloc)
except ValueError:
valid_endpoint = False
if not valid_endpoint:
raise ValueError("CORPUS_S3_ENDPOINT must be a URL with a scheme (https://host[:port])")
settings = {
"endpoint": endpoint,
"bucket": environ["CORPUS_S3_BUCKET"],
"access_key": environ["CORPUS_AWS_ACCESS_KEY_ID"],
"secret_key": environ["CORPUS_AWS_SECRET_ACCESS_KEY"],
}
if environ.get("CORPUS_S3_REGION"):
settings["region"] = environ["CORPUS_S3_REGION"]
return settings
class CorpusObjects:
"""Plain S3 put/get/list, with no bucket administration or capability probes."""
def __init__(self, *, endpoint: str, bucket: str, access_key: str, secret_key: str, region: str | None = None):
import boto3
from botocore.config import Config
self.bucket = bucket
self.client = boto3.client(
"s3",
endpoint_url=endpoint,
aws_access_key_id=access_key,
aws_secret_access_key=secret_key,
region_name=region or "us-east-1",
# RustFS/MinIO at an IP endpoint needs path-style addressing
# (virtual-host bucket.<ip> does not resolve) and SigV4. Verified
# against ousast-corpus @ 10.0.0.54:9001.
config=Config(
signature_version="s3v4",
s3={"addressing_style": "path"},
retries={"total_max_attempts": 1},
),
)
def get(self, key: str) -> tuple[bytes, str] | None:
try:
result = self.client.get_object(Bucket=self.bucket, Key=key)
except Exception as error:
if getattr(error, "response", {}).get("Error", {}).get("Code") in {"NoSuchKey", "404", "NotFound"}:
return None
raise
body = result["Body"]
try:
return body.read(), result.get("VersionId") or result.get("ETag", "")
finally:
body.close()
def put(self, key: str, data: bytes, labels: dict) -> None:
self.client.put_object(
Bucket=self.bucket,
Key=key,
Body=data,
ContentType="application/json",
Tagging=urlencode(labels),
)
def keys(self, prefix: str) -> list[str]:
pages = self.client.get_paginator("list_objects_v2").paginate(Bucket=self.bucket, Prefix=prefix)
return [item["Key"] for page in pages for item in page.get("Contents", [])]
def _retry(operation, *args, **kwargs):
"""Retry one object operation once; a second failure is fatal to durability."""
try:
return operation(*args, **kwargs)
except Exception:
return operation(*args, **kwargs)
class CorpusBank:
def __init__(self, client, *, seed: int, prefix: str = "unseen"):
self.client = client
self.seed = seed
self.decisions_prefix = f"{prefix}/{seed}/decisions/"
@staticmethod
def key_for(repository: str, fix: str) -> str:
return hashlib.sha256(f"{repository}\n{fix}".encode()).hexdigest()
def bank(self, repository: str, fix: str, result: dict, *, contract: str) -> None:
decision = {
"repository": repository,
"fix": fix,
"decision": "accept" if "entry" in result else "reject",
"reason": result.get("rejected"),
"entry": result.get("entry"),
"ordinary_exclusions": result.get("ordinary_exclusions", {}),
"counts": result.get("counts", {}),
"contract": contract,
"seed": self.seed,
}
key = self.decisions_prefix + self.key_for(repository, fix) + ".json"
existing = _retry(self.client.get, key)
if existing is not None:
previous = json.loads(existing[0])
if {field: value for field, value in previous.items() if field != "ts"} == decision:
return # Preserve the first timestamp and avoid an unnecessary object version.
decision["ts"] = datetime.now(UTC).isoformat()
data = json.dumps(decision, sort_keys=True, separators=(",", ":"), ensure_ascii=False).encode()
_retry(self.client.put, key, data, labels={"decision": decision["decision"], "contract": contract})
def decided(self) -> dict[str, dict]:
decisions = {}
for key in sorted(self.client.keys(self.decisions_prefix)):
stored = _retry(self.client.get, key)
if stored is None:
raise ValueError("corpus_decision_missing")
decision = json.loads(stored[0])
digest = self.key_for(decision["repository"], decision["fix"])
if key != self.decisions_prefix + digest + ".json" or decision["seed"] != self.seed:
raise ValueError("corpus_decision_identity")
if decision["decision"] not in {"accept", "reject"}:
raise ValueError("corpus_decision_invalid")
decisions[digest] = decision
return decisions
def split_decided(decisions: Mapping[str, dict], *, contract: str) -> tuple[list[dict], set[str]]:
"""Split reusable results, sorted independently of bucket listing order.
The coordinator merges entries into the full advisory population before seeded
ordering: shuffling only the accepted subset would change the draw's order.
"""
accepted = [row["entry"] for row in decisions.values() if row["decision"] == "accept"]
accepted.sort(key=lambda entry: (entry.get("advisory", ""), entry["repository"], entry["fix"]))
reusable = {key for key, row in decisions.items() if row["decision"] == "accept" or row["contract"] == contract}
return accepted, reusable
+138 -13
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@@ -2,7 +2,7 @@
All network and git operations are injected at the run() boundary. Only counts,
digests and fixed failure codes go to stdout; identity-bearing output stays in the
private journal outside the repository. No population guard is run here.
private journal or corpus bucket. No population guard is run here.
"""
from __future__ import annotations
@@ -20,12 +20,13 @@ import time
from collections import Counter, defaultdict, deque
from concurrent.futures import FIRST_COMPLETED, ProcessPoolExecutor, wait
from concurrent.futures.process import BrokenProcessPool
from contextlib import contextmanager
from contextlib import ExitStack, contextmanager
from dataclasses import asdict
from pathlib import Path
from . import eligibility, extract, source
from .extract import Git, InstrumentFailure
from .bank import CorpusBank, CorpusObjects, corpus_settings, split_decided
from .extract import EXTRACTION_CONTRACT, Git, InstrumentFailure
from .journal import Journal, ResolvedGitHub, ResumeMismatch, Stopped, atomic, digest, external
@@ -367,7 +368,21 @@ def finish_license(result, github):
@contextmanager
def ordered_extractions(rows, api, osv, used, clones, fixes, seed, checkpoint, entries, workers, pool_size):
def ordered_extractions(
rows,
api,
osv,
used,
clones,
fixes,
seed,
checkpoint,
entries,
workers,
pool_size,
bank: CorpusBank | None = None,
decided=None,
):
"""Bounded in-flight work, completion journaling, and seed-order acceptance.
Only running jobs count against `workers`; completed results wait in the
@@ -376,6 +391,8 @@ def ordered_extractions(rows, api, osv, used, clones, fixes, seed, checkpoint, e
Graceful STOP/guard/target exits drain started work into the journal for resume;
a hard interrupt may lose unjournaled work but cannot change accepted order.
"""
decided = dict(decided or {})
identities = {}
pending = deque() # Seed-order acceptance cursor; contains no futures/results.
in_flight = {} # Future -> extraction key, independent of the cursor.
# Fork shares the coordinator's memory copy-on-write. Jobs receive only the
@@ -383,8 +400,22 @@ def ordered_extractions(rows, api, osv, used, clones, fixes, seed, checkpoint, e
context = multiprocessing.get_context("fork")
pool = ProcessPoolExecutor(max_workers=workers, mp_context=context)
def remember(repository, fix, result):
bank.bank(repository, fix, result, contract=EXTRACTION_CONTRACT)
# Reuse decisions made during this invocation too: another advisory for
# the same pair must not overwrite an earlier accept with a rejection.
decided[bank.key_for(repository, fix)] = {
"repository": repository,
"fix": fix,
"decision": "accept" if "entry" in result else "reject",
"entry": result.get("entry"),
"reason": result.get("rejected"),
"ordinary_exclusions": result.get("ordinary_exclusions", {}),
"counts": result.get("counts", {}),
}
def collect(future):
key = in_flight[future]
key = in_flight.pop(future)
try:
result = future.result()
except BrokenProcessPool:
@@ -401,8 +432,10 @@ def ordered_extractions(rows, api, osv, used, clones, fixes, seed, checkpoint, e
else:
clones.counts[name] += value
result = finish_license(result, api)
if bank is not None:
repository, fix = identities[key]
remember(repository, fix, result)
checkpoint.put("extraction", key, result)
del in_flight[future]
def iterate():
nonlocal pool
@@ -428,6 +461,53 @@ def ordered_extractions(rows, api, osv, used, clones, fixes, seed, checkpoint, e
exhausted = True
break
key = row["ghsa_id"]
identity = None
if bank is not None:
links = source.fix_links(row)
if len(links) == 1:
repository, fix = next(iter(links))
try:
resolved = eligibility.resolve(repository, api)
repository = resolved.full_name
except eligibility.RepositoryNotFound:
resolved = None
except ValueError as exc:
if str(exc) != "http_failure":
raise
resolved = None # decide() records this as a resilient skip.
identity = (repository, fix)
saved = decided.get(bank.key_for(*identity))
if saved is None and len(fix) < 40:
matches = [
value for value in decided.values() if value["repository"] == repository and value["fix"].startswith(fix)
]
if len(matches) == 1:
saved = matches[0]
identity = (repository, saved["fix"])
if saved is None:
# A duplicate advisory can arrive before its pair's
# worker finishes. Share that pending result as well.
matching = [key for key, pair in identities.items() if pair[0] == repository and pair[1].startswith(fix)]
if len(matching) == 1:
pending.append((row, {"network": resolved.network if resolved else repository}, matching[0]))
break
if saved is not None:
decision = {"network": resolved.network if resolved is not None else repository}
blocked = eligibility.rejection(resolved, used, set()) if resolved is not None else None
if blocked:
decision["rejected"] = "used_" + blocked
pending.append((row, decision, None))
else:
result = {"ordinary_exclusions": saved["ordinary_exclusions"], "counts": saved["counts"]}
if saved["decision"] == "accept":
result["entry"] = saved["entry"]
else:
result["rejected"] = saved["reason"]
extraction_key = bank.key_for(*identity)
if extraction_key not in checkpoint.rows["extraction"]:
checkpoint.put("extraction", extraction_key, result)
pending.append((row, decision, extraction_key))
break
if key not in checkpoint.rows["eligibility"]:
checkpoint.put("eligibility", key, decide(row, api, osv, used))
decision = checkpoint.rows["eligibility"][key]
@@ -435,7 +515,10 @@ def ordered_extractions(rows, api, osv, used, clones, fixes, seed, checkpoint, e
if "candidate" in decision:
candidate = source.Candidate(**decision["candidate"])
extraction_key = digest({"repository": candidate.repository, "advisory": key, "fix": candidate.fix})
if extraction_key not in checkpoint.rows["extraction"]:
if bank is not None:
extraction_key = bank.key_for(candidate.repository, candidate.fix)
identities[extraction_key] = (candidate.repository, candidate.fix)
if extraction_key not in checkpoint.rows["extraction"] and extraction_key not in in_flight.values():
checkpoint.boundary()
local = copy.copy(clones)
local.counts = Counter()
@@ -449,6 +532,8 @@ def ordered_extractions(rows, api, osv, used, clones, fixes, seed, checkpoint, e
pool = ProcessPoolExecutor(max_workers=workers, mp_context=context)
future = pool.submit(extract_repository, *args)
in_flight[future] = extraction_key
elif bank is not None and identity is not None:
remember(*identity, decision)
pending.append((row, decision, extraction_key))
# Finalize cached decisions promptly (especially on resume), and
# service completed jobs even during a long run of decide skips.
@@ -482,7 +567,7 @@ def ordered_extractions(rows, api, osv, used, clones, fixes, seed, checkpoint, e
checkpoint.progress("stopped", reason=stopped)
def publish(journal, assigned, seed):
def publish(journal, assigned, seed, *, destination=None):
"""Idempotent publication from completed journal data, never inside the checkout."""
public, private = [], []
for row in assigned:
@@ -492,7 +577,7 @@ def publish(journal, assigned, seed):
private.append(row)
public.append({"id": row["id"], "sha256": private_digest(row), "slice": row["slice"], "private": True})
for name, rows in (("private-draft-p1.toml", private), ("draft-p1.toml", public)):
path = journal.path / name
path = (destination or journal.path) / name
data = manifest(rows, seed).encode()
if path.exists():
if path.read_bytes() != data:
@@ -516,6 +601,7 @@ def run(
extract_workers=None,
pool_size=300,
slices=3,
bank: CorpusBank | None = None,
) -> dict:
validate_pool(pool_size, slices)
workers = extract_workers if extract_workers is not None else getattr(clones, "extract_workers", 6)
@@ -530,13 +616,25 @@ def run(
report["parse_deadline_seconds"] = getattr(clones, "parse_deadline_seconds", None)
counts, rejected, ordinary_counts = Counter(), Counter(), Counter()
checkpoint = None
scratch = ExitStack()
try:
decided = bank.decided() if bank is not None else {}
accepted, reusable = split_decided(decided, contract=EXTRACTION_CONTRACT)
decided = {key: value for key, value in decided.items() if key in reusable}
known_empty = set(known_empty or ())
used.report(known_empty)
cache = getattr(clones, "cache", root.parent / (root.name + "-cache"))
path = external(root, journal_path or cache / "journal")
journal_directory = path
if bank is not None:
# Local records are a disposable cursor, never a cross-run authority.
path.mkdir(parents=True, exist_ok=True, mode=0o700)
journal_directory = Path(scratch.enter_context(tempfile.TemporaryDirectory(prefix="cursor-", dir=path)))
checkpoint = Journal(
path, max_hours=max_hours, clock=clock, rate_limit=lambda: getattr(getattr(github, "transport", None), "rate_limit", {})
journal_directory,
max_hours=max_hours,
clock=clock,
rate_limit=lambda: getattr(getattr(github, "transport", None), "rate_limit", {}),
)
with checkpoint.open(inputs(used, seed, known_empty, clones, pool_size=pool_size, slices=slices)):
checkpoint.boundary()
@@ -544,7 +642,26 @@ def run(
used = copy.deepcopy(used) # canonicalization must not mutate the resume input
eligibility.canonicalize_used(used, api)
report["used_set"] = used.report(known_empty)
rows = enumerate_advisories(api, checkpoint)
try:
rows = enumerate_advisories(api, checkpoint)
except InstrumentFailure as exc:
if str(exc) != "empty_advisories" or not accepted:
raise
rows = []
if bank is not None:
# Retain accepted entries even if their advisory disappeared upstream.
present = {row["ghsa_id"] for row in rows}
for entry in accepted:
if entry["advisory"] not in present:
rows.append(
{
"ghsa_id": entry["advisory"],
"published_at": "2026-06-02" if entry["post_cutoff"] else "2026-06-01",
"vulnerabilities": [{"package": {"ecosystem": entry["ecosystem"]}}],
"references": [f"https://github.com/{entry['repository']}/commit/{entry['fix']}"],
}
)
present.add(entry["advisory"])
report["advisories"] = len(rows)
fixes_by_repo = advisory_index(rows, api)
selected_networks, entries = set(), []
@@ -561,6 +678,8 @@ def run(
entries,
workers,
pool_size,
bank=bank,
decided=decided,
) as outcomes:
for row, decision, result in outcomes:
counts[source.ecosystem(row)] += 1
@@ -575,7 +694,9 @@ def run(
ordinary_counts.update(result["ordinary_exclusions"])
if "rejected" in result:
rejected[result["rejected"]] += 1
instrument_failures += int(result["rejected"].startswith("extract_"))
instrument_failures += int(
result["rejected"].startswith("extract_") or result["rejected"] == "decide_http_failure"
)
else:
selected_networks.add(decision["network"])
entries.append(result["entry"])
@@ -605,7 +726,7 @@ def run(
elif checkpoint.rows["completion"]["all"] != completion:
raise ValueError("journal_completion_mismatch")
checkpoint.boundary()
publish(checkpoint, assigned, seed)
publish(checkpoint, assigned, seed, destination=path if bank is not None else None)
report.update(
{
"status": "draft",
@@ -629,6 +750,7 @@ def run(
report.update({"status": "instrument_failure", "error_type": type(exc).__name__})
return report
finally:
scratch.close()
report.update({"candidates": dict(counts), "rejections": dict(rejected), "ordinary_exclusions": dict(ordinary_counts)})
report["instrument"] = dict(clones.counts)
report["wall_seconds"] = round(time.monotonic() - started, 3)
@@ -658,6 +780,7 @@ def main(argv: list[str] | None = None) -> int:
parser.add_argument("--pool-size", type=int, default=300, help="Repositories to accept (default: 300)")
parser.add_argument("--slices", type=int, default=3, help="Equal-sized slices (default: 3)")
parser.add_argument("--seed", type=int, default=20260601)
parser.add_argument("--bank", nargs="?", const="unseen", default="", help="Corpus bucket prefix; enables durable decisions")
parser.add_argument("--local-store")
parser.add_argument("--s3-store", default="s3://")
parser.add_argument("--pointer-manifest", type=Path, action="append", default=[])
@@ -686,6 +809,7 @@ def main(argv: list[str] | None = None) -> int:
"s3": memory.open_store(args.s3_store, read_only=True),
}
used = eligibility.build_used(args.root, stores=stores, pointer_manifests=args.pointer_manifest)
bank = CorpusBank(CorpusObjects(**corpus_settings()), seed=args.seed, prefix=args.bank) if args.bank else None
report = run(
args.root,
github=source.GitHub(os.environ.get("GH_TOKEN", "")),
@@ -698,6 +822,7 @@ def main(argv: list[str] | None = None) -> int:
known_empty=set(args.known_empty),
journal_path=clones.cache / "journal",
max_hours=args.max_hours,
bank=bank,
)
except Exception as exc:
report = {"status": "instrument_failure", "error_type": type(exc).__name__}
+3
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@@ -19,6 +19,9 @@ from pathlib import Path
from .source import Candidate, Rejected
# Bump only when accept/reject outcomes or accepted entry bytes change.
EXTRACTION_CONTRACT = "v1"
LANGUAGES = {".py", ".js", ".jsx", ".mjs", ".cjs", ".ts", ".tsx", ".php", ".java"}
HUNK = re.compile(r"^@@ -(\d+)(?:,(\d+))? \+(\d+)(?:,(\d+))? @@", re.M)
SHA = re.compile(r"[a-f0-9]{40}")
+216
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@@ -0,0 +1,216 @@
"""Offline decision-bank contract: durability, identity and plain object transport."""
import hashlib
import io
import json
import sys
from datetime import datetime
from types import SimpleNamespace
import pytest
from benchmarks.unseen.bank import CorpusBank, CorpusObjects, corpus_settings, split_decided
class FakeObjects:
def __init__(self):
self.objects = {}
self.labels = {}
self.calls = []
self.failures = {}
def call(self, operation):
self.calls.append(operation)
if self.failures.get(operation, 0):
self.failures[operation] -= 1
raise OSError("offline failure")
def get(self, key):
self.call("get")
return (self.objects[key], "version") if key in self.objects else None
def put(self, key, data, labels):
self.call("put")
self.objects[key] = data
self.labels[key] = labels
def keys(self, prefix):
return [key for key in reversed(self.objects) if key.startswith(prefix)]
def settings_env():
return {
"CORPUS_S3_ENDPOINT": "https://objects.invalid",
"CORPUS_S3_BUCKET": "ousast-corpus",
"CORPUS_AWS_ACCESS_KEY_ID": "private-access",
"CORPUS_AWS_SECRET_ACCESS_KEY": "private-secret",
}
@pytest.mark.parametrize("missing", list(settings_env()))
def test_settings_names_missing_key_without_values(missing):
env = settings_env()
del env[missing]
with pytest.raises(ValueError) as error:
corpus_settings(env)
assert missing in str(error.value)
assert all(value not in str(error.value) for value in env.values())
def test_settings_and_optional_region():
env = settings_env()
assert corpus_settings(env) == {
"endpoint": env["CORPUS_S3_ENDPOINT"],
"bucket": "ousast-corpus",
"access_key": "private-access",
"secret_key": "private-secret",
}
assert corpus_settings({**env, "CORPUS_S3_REGION": "region-1"})["region"] == "region-1"
def test_bank_roundtrip_and_idempotent_bytes():
objects = FakeObjects()
bank = CorpusBank(objects, seed=42)
entry = {"repository": "org/a", "fix": "abc", "advisory": "GHSA-a", "changes": [{"code": "text"}]}
result = {"entry": entry, "ordinary_exclusions": {"merge": 2}, "counts": {"eligible": 13}}
key = bank.key_for("org/a", "abc")
assert key == hashlib.sha256(b"org/a\nabc").hexdigest()
bank.bank("org/a", "abc", result, contract="v1")
original = objects.objects.copy()
bank.bank("org/a", "abc", result, contract="v1")
assert objects.objects == original
assert list(objects.objects) == [f"unseen/42/decisions/{key}.json"]
row = bank.decided()[key]
assert row == {
"repository": "org/a",
"fix": "abc",
"decision": "accept",
"reason": None,
"entry": entry,
"ordinary_exclusions": {"merge": 2},
"counts": {"eligible": 13},
"contract": "v1",
"seed": 42,
"ts": row["ts"],
}
assert datetime.fromisoformat(row["ts"]).utcoffset().total_seconds() == 0
assert objects.labels[next(iter(objects.labels))] == {"decision": "accept", "contract": "v1"}
def test_rejection_contract_update_and_split():
objects = FakeObjects()
bank = CorpusBank(objects, seed=3, prefix="custom")
for repo, advisory in (("z", "GHSA-z"), ("a", "GHSA-a")):
bank.bank(repo, "fix", {"entry": {"repository": repo, "fix": "fix", "advisory": advisory}}, contract="old")
bank.bank("no", "fix", {"rejected": "reason"}, contract="v1")
bank.bank("stale", "fix", {"rejected": "reason"}, contract="old")
accepted, keys = split_decided(bank.decided(), contract="v1")
assert [entry["repository"] for entry in accepted] == ["a", "z"]
assert keys == {bank.key_for(repo, "fix") for repo in ("a", "z", "no")}
row = bank.decided()[bank.key_for("no", "fix")]
assert row["reason"] == "reason" and row["decision"] == "reject"
assert row["entry"] is None and row["counts"] == row["ordinary_exclusions"] == {}
bank.bank("stale", "fix", {"rejected": "different"}, contract="v1")
assert len(objects.objects) == 4
assert bank.decided()[bank.key_for("stale", "fix")]["contract"] == "v1"
@pytest.mark.parametrize("operation", ["get", "put"])
@pytest.mark.parametrize("failures", [1, 2])
def test_bank_retries_once_then_surfaces_failure(operation, failures):
objects = FakeObjects()
objects.failures[operation] = failures
bank = CorpusBank(objects, seed=1)
if failures == 1:
bank.bank("repo", "fix", {"rejected": "reason"}, contract="v1")
assert len(objects.objects) == 1
else:
with pytest.raises(OSError, match="offline failure"):
bank.bank("repo", "fix", {"rejected": "reason"}, contract="v1")
assert objects.calls.count(operation) == 2
def test_decided_retries_get_and_fails_on_missing_listed_object():
objects = FakeObjects()
bank = CorpusBank(objects, seed=1)
bank.bank("repo", "fix", {"rejected": "reason"}, contract="v1")
objects.failures["get"] = 1
assert len(bank.decided()) == 1
objects.get = lambda key: None
with pytest.raises(ValueError, match="missing"):
bank.decided()
def test_plain_s3_adapter_without_bucket_probes(monkeypatch):
calls = []
class Missing(Exception):
response = {"Error": {"Code": "NoSuchKey"}}
class S3:
def put_object(self, **kwargs):
calls.append(("put", kwargs))
def get_object(self, **kwargs):
calls.append(("get", kwargs))
if kwargs["Key"] == "missing":
raise Missing()
return {"Body": io.BytesIO(b"data"), "ETag": "tag"}
def get_paginator(self, name):
assert name == "list_objects_v2"
return SimpleNamespace(paginate=self.pages)
def pages(self, **kwargs):
calls.append(("list", kwargs))
return [{"Contents": [{"Key": "p/a"}]}, {}, {"Contents": [{"Key": "p/b"}]}]
def client(service, **kwargs):
calls.append((service, kwargs))
return S3()
monkeypatch.setitem(sys.modules, "boto3", SimpleNamespace(client=client))
monkeypatch.setitem(sys.modules, "botocore.config", SimpleNamespace(Config=lambda **kwargs: SimpleNamespace(**kwargs)))
adapter = CorpusObjects(**corpus_settings(settings_env()))
adapter.put("p/a", b"data", {"decision": "accept", "contract": "v1"})
assert adapter.get("p/a") == (b"data", "tag")
assert adapter.get("missing") is None
assert adapter.keys("p/") == ["p/a", "p/b"]
assert calls[0][0] == "s3"
assert calls[0][1]["endpoint_url"] == "https://objects.invalid"
assert calls[0][1]["config"].retries == {"total_max_attempts": 1}
assert calls[1][1]["Bucket"] == "ousast-corpus"
assert calls[1][1]["Body"] == b"data"
assert calls[-1] == ("list", {"Bucket": "ousast-corpus", "Prefix": "p/"})
def test_decided_rejects_invalid_identity():
objects = FakeObjects()
bank = CorpusBank(objects, seed=1)
bank.bank("repo", "fix", {"rejected": "reason"}, contract="v1")
key = next(iter(objects.objects))
row = json.loads(objects.objects[key])
row["repository"] = "other"
objects.objects[key] = json.dumps(row).encode()
with pytest.raises(ValueError, match="identity"):
bank.decided()
@pytest.mark.parametrize("endpoint", ["missing-scheme-private", "https://private[", "http://private/secret"])
def test_invalid_endpoint_does_not_expose_value(endpoint):
with pytest.raises(ValueError) as error:
corpus_settings({**settings_env(), "CORPUS_S3_ENDPOINT": endpoint})
assert "CORPUS_S3_ENDPOINT" in str(error.value)
assert endpoint not in str(error.value)
def test_import_does_not_require_boto3(monkeypatch):
import importlib.util
from benchmarks.unseen import bank
monkeypatch.setitem(sys.modules, "boto3", None)
spec = importlib.util.spec_from_file_location("offline_bank", bank.__file__)
module = importlib.util.module_from_spec(spec)
spec.loader.exec_module(module)
assert module.CorpusBank.key_for("a", "b") == CorpusBank.key_for("a", "b")
+298
View File
@@ -1519,3 +1519,301 @@ def test_pool_configuration_change_refuses_resume_before_io(tmp_path, changed):
)
assert report["status"] == "resume_refused" and report["changed_parameters"] == list(changed)
assert api.calls == 0 and not clones.counts
class CorpusFakeObjects:
def __init__(self):
self.objects = {}
self.coordinator = os.getpid()
def get(self, key):
assert os.getpid() == self.coordinator
return (self.objects[key], "v1") if key in self.objects else None
def put(self, key, data, labels):
assert os.getpid() == self.coordinator
self.objects[key] = data
def keys(self, prefix):
assert os.getpid() == self.coordinator
return list(reversed([key for key in self.objects if key.startswith(prefix)]))
@pytest.mark.parametrize("workers", [1, 4])
@pytest.mark.parametrize("short_refs", [False, True])
def test_bank_resume_stream_contract_seed_order_and_forks(tmp_path, monkeypatch, workers, short_refs):
from benchmarks.unseen.bank import CorpusBank
monkeypatch.setattr(importlib.import_module("benchmarks.unseen.journal").os, "fsync", lambda fd: None)
ordered = s.ordered_advisories(list(FakeAPI(10).advisories()), 7)
names = [next(iter(s.fix_links(row)))[0] for row in ordered]
ranks = {name: i for i, name in enumerate(names)}
called = multiprocessing.get_context("fork").Array("i", 10)
changes = entries()[0]["changes"]
selected = []
original_assign = d.assign_slices
class API(FakeAPI):
def advisories(self):
for row in super().advisories():
if short_refs:
row["references"] = [row["references"][0][:-33]]
yield row
def get_commit(self, name, sha):
return super().get_commit(name, "a" * 40)
def get_repo(self, name):
result = super().get_repo(name)
if name == names[3]:
result["source"] = {"full_name": names[1]}
return result
def extract_changes(git, candidate, fixes, *, seed):
rank = ranks[candidate.repository]
called[rank] += 1
if rank == 0:
raise s.Rejected("no_ordinary")
return copy.deepcopy(changes), {"eligible": 40}, {"bytes": 12, "files": 1}
def assign(rows, **kwargs):
selected.append([row["repository"] for row in rows])
return original_assign(rows, **kwargs)
monkeypatch.setattr(d, "repository_changes", extract_changes)
monkeypatch.setattr(d, "assign_slices", assign)
def run(path, bank=None):
used = e.UsedSet()
return d.run(
tmp_path / "repo",
github=API(10),
osv=FakeOSV(),
clones=FakeClones(),
used=used,
seed=7,
known_empty=set(used.sources),
journal_path=path,
extract_workers=workers,
pool_size=4,
slices=1,
bank=bank,
)
full_objects = CorpusFakeObjects()
full_bank = CorpusBank(full_objects, seed=7)
full = run(tmp_path / "full", full_bank)
assert full["status"] == "draft", full
decisions = full_bank.decided()
assert len(decisions) == sum(called)
assert {obj["decision"] for obj in decisions.values()} == {"accept", "reject"}
resumed_objects = CorpusFakeObjects()
resumed_bank = CorpusBank(resumed_objects, seed=7)
# Partial completion can be out of seed order, including a fork that loses
# to an earlier fresh result. Rejections alone are contract sensitive.
for obj in decisions.values():
rank = ranks[obj["repository"]]
if rank in {0, 2, 3}:
result = {"entry": obj["entry"]} if obj["decision"] == "accept" else {"rejected": obj["reason"]}
result.update(ordinary_exclusions=obj["ordinary_exclusions"], counts=obj["counts"])
resumed_bank.bank(
obj["repository"], obj["fix"], result, contract=d.EXTRACTION_CONTRACT if rank == 0 else "old-accepted-contract"
)
resumed_bank.bank(names[1], "a" * 40, {"rejected": "old_failure"}, contract="old")
before = list(called)
resumed = run(tmp_path / "resume", resumed_bank)
assert resumed["status"] == "draft", resumed
assert selected == [[names[i] for i in (1, 2, 4, 5)]] * 2
assert resumed["manifest_sha256"] == full["manifest_sha256"]
assert all(called[i] == before[i] for i in (0, 2, 3))
assert called[1] == before[1] + 1
for filename in ("draft-p1.toml", "private-draft-p1.toml"):
assert (tmp_path / "resume" / filename).read_bytes() == (tmp_path / "full" / filename).read_bytes()
# A corrupt/stale local journal and code fingerprint must not be cross-run truth.
(tmp_path / "resume" / "inputs.json").write_text('{"design_draft":"old"}')
(tmp_path / "resume" / "extraction.jsonl").write_text("torn")
before = list(called)
again = run(tmp_path / "resume", resumed_bank)
assert again["manifest_sha256"] == full["manifest_sha256"]
assert list(called) == before
@pytest.mark.parametrize("failure", ["crash", "persistent_put"])
def test_bank_crash_resume_and_durability_failure(tmp_path, monkeypatch, failure):
from benchmarks.unseen.bank import CorpusBank
monkeypatch.setattr(importlib.import_module("benchmarks.unseen.journal").os, "fsync", lambda fd: None)
changes = entries()[0]["changes"]
monkeypatch.setattr(d, "repository_changes", lambda *a, **kw: (copy.deepcopy(changes), {}, {"bytes": 1, "files": 1}))
class Objects(CorpusFakeObjects):
interrupted = False
puts = 0
def put(self, key, data, labels):
self.puts += 1
if failure == "persistent_put" and not self.interrupted:
raise OSError("offline simulated bank outage")
super().put(key, data, labels)
if not self.interrupted:
self.interrupted = True
raise KeyboardInterrupt
objects = Objects()
bank = CorpusBank(objects, seed=7)
def run(path, bank):
used = e.UsedSet()
return d.run(
tmp_path / "repo",
github=FakeAPI(8),
osv=FakeOSV(),
clones=FakeClones(),
used=used,
seed=7,
known_empty=set(used.sources),
journal_path=path,
extract_workers=1,
pool_size=3,
slices=1,
bank=bank,
)
if failure == "crash":
with pytest.raises(KeyboardInterrupt):
run(tmp_path / "resume", bank)
assert len(bank.decided()) == 1
else:
report = run(tmp_path / "resume", bank)
assert report["status"] == "instrument_failure"
assert objects.puts == 2
assert not objects.objects
assert not (tmp_path / "resume" / "draft-p1.toml").exists()
objects.interrupted = True
resumed = run(tmp_path / "resume", bank)
full = run(tmp_path / "full", None)
assert resumed["status"] == full["status"] == "draft"
assert resumed["manifest_sha256"] == full["manifest_sha256"]
@pytest.mark.parametrize("bank_args,prefix", [([], None), (["--bank"], "unseen"), (["--bank", "custom"], "custom")])
def test_cli_corpus_bank_is_opt_in(tmp_path, monkeypatch, capsys, bank_args, prefix):
from openultrasast import config
from openultrasast.plane import memory
objects = CorpusFakeObjects()
monkeypatch.setattr(config, "load_dotenv", lambda *a: None)
monkeypatch.setattr(memory, "open_store", lambda *a, **kw: object())
monkeypatch.setattr(d.eligibility, "build_used", lambda *a, **kw: e.UsedSet())
monkeypatch.setattr(d.source, "GitHub", lambda *a: FakeAPI(0))
monkeypatch.setattr(d.source, "OSV", FakeOSV)
settings_calls = []
monkeypatch.setattr(d, "corpus_settings", lambda: settings_calls.append(True) or {"bucket": "ousast-corpus"})
def make_objects(**kwargs):
assert kwargs == {"bucket": "ousast-corpus"}
return objects
def run(*args, **kwargs):
bank = kwargs["bank"]
if prefix is None:
assert bank is None
else:
assert bank.client is objects and bank.decisions_prefix == f"{prefix}/7/decisions/"
return {"status": "draft"}
monkeypatch.setattr(d, "CorpusObjects", make_objects)
monkeypatch.setattr(d, "run", run)
assert d.main(["--root", str(tmp_path / "repo"), "--cache", str(tmp_path / "cache"), "--seed", "7", *bank_args]) == 0
assert settings_calls == ([] if prefix is None else [True])
def test_bank_accepts_survive_missing_advisories_and_obey_used_networks(tmp_path, monkeypatch):
from benchmarks.unseen.bank import CorpusBank
objects = CorpusFakeObjects()
bank = CorpusBank(objects, seed=7)
rows = s.ordered_advisories(list(FakeAPI(4).advisories()), 7)
names = [next(iter(s.fix_links(row)))[0] for row in rows]
for row in rows:
candidate = s.candidate(row, FakeAPI(), FakeOSV())
entry = {**d.asdict(candidate), "changes": entries()[0]["changes"], "instrument": {"bytes": 12, "files": 1}}
bank.bank(candidate.repository, candidate.fix, {"entry": entry}, contract="older")
class API(FakeAPI):
def get_repo(self, name):
result = super().get_repo(name)
if name == names[2]:
result["source"] = {"full_name": names[1]}
return result
def get_commit(self, *args):
pytest.fail("banked accepts must not be re-decided")
used = e.UsedSet()
used.add("pairs", {names[0]}, size=len(names[0]))
selected = []
original = d.assign_slices
def assign(rows, **kwargs):
selected.extend(row["repository"] for row in rows)
return original(rows, **kwargs)
monkeypatch.setattr(d, "assign_slices", assign)
report = d.run(
tmp_path / "repo",
github=API(0),
osv=FakeOSV(),
clones=FakeClones(),
used=used,
seed=7,
known_empty={key for key, names in used.sources.items() if not names},
journal_path=tmp_path / "journal",
pool_size=2,
slices=1,
bank=bank,
)
assert report["status"] == "draft", report
assert selected == [names[1], names[3]]
assert report["rejections"]["fork_network"] == 1
assert len(bank.decided()) == 4
@pytest.mark.parametrize("workers", [1, 4])
def test_bank_duplicate_advisory_cannot_overwrite_pair_decision(tmp_path, monkeypatch, workers):
from benchmarks.unseen.bank import CorpusBank
rows = s.ordered_advisories(list(FakeAPI(6).advisories()), 7)
rows[1]["references"] = rows[0]["references"][:]
rows[1]["cwes"] = [] # Would reject if re-decided under this later advisory.
repository, fix = next(iter(s.fix_links(rows[0])))
class API(FakeAPI):
def advisories(self):
return iter(copy.deepcopy(rows))
changes = entries()[0]["changes"]
monkeypatch.setattr(d, "repository_changes", lambda *a, **kw: (copy.deepcopy(changes), {}, {"bytes": 12, "files": 1}))
bank = CorpusBank(CorpusFakeObjects(), seed=7)
reports = []
for name in ("first", "resumed"):
used = e.UsedSet()
reports.append(
d.run(
tmp_path / "repo",
github=API(),
osv=FakeOSV(),
clones=FakeClones(),
used=used,
known_empty=set(used.sources),
seed=7,
pool_size=3,
slices=1,
extract_workers=workers,
journal_path=tmp_path / name,
bank=bank,
)
)
assert all(report["status"] == "draft" for report in reports)
assert reports[0]["manifest_sha256"] == reports[1]["manifest_sha256"]
assert bank.decided()[bank.key_for(repository, fix)]["decision"] == "accept"